Center for Biodiversity Studies Publications

2021

Peer-Reviewed

Arrieta, R. S., L. Campagna, B. Mahler, I. Lovette, and P. E. Llambías (2021). Double-digest RAD sequencing reveals low rates of conspecific brood parasitism and no cases of quasi-parasitism in a Neotropical passerine. The Wilson Journal of Ornithology 132:733–739.
Austin, V. I., A. H. Dalziell, N. E. Langmore, and J. A. Welbergen (2021). Avian vocalisations: the female perspective. Biological Reviews:20.
Backhouse, F., A. H. Dalziell, R. D. Magrath, A. N. Rice, T. L. Crisologo, and J. A. Welbergen (2021). Differential geographic patterns in song components of male Albert's lyrebirds. Ecology and Evolution 11:2701–2716.
Baiz, M. D., A. W. Wood, A. Brelsford, I. J. Lovette, and D. P. L. Toews (2021). Pigmentation Genes Show Evidence of Repeated Divergence and Multiple Bouts of Introgression in Setophaga Warblers. Current Biology 31:643-649.e3.
Chesser, R. T., S. M. Billerman, K. J. Burns, C. Cicero, J. L. Dunn, A. W. Kratter, I. J. Lovette, N. A. Mason, P. C. Rasmussen, J. V. Remsen, D. F. Stotz, and K. Winker (2021). Addendum to the Sixty-first Supplement to the American Ornithological Society's Check-list of North American Birds. The Auk:ukaa074.
Dalziell, A. H., A. C. Maisey, R. D. Magrath, and J. A. Welbergen (2021). Male lyrebirds create a complex acoustic illusion of a mobbing flock during courtship and copulation. Current Biology:S0960982221002104.
Demery, A.-J. C., K. J. Burns, and N. A. Mason (2021). Bill size, bill shape, and body size constrain bird song evolution on a macroevolutionary scale. Ornithology:ukab011.
Egan, J. P., T. J. Buser, M. D. Burns, A. M. Simons, and P. J. Hundt (2021). Patterns of Body Shape Diversity and Evolution in Intertidal and Subtidal Lineages of Combtooth Blennies (Blenniidae). Integrative Organismal Biology 3:obab004.
Fayet, A. L., G. V. Clucas, T. Anker‐Nilssen, M. Syposz, and E. S. Hansen (2021). Local prey shortages drive foraging costs and breeding success in a declining seabird, the Atlantic puffin. Journal of Animal Ecology:1365-2656.13442.
García, N. C., and W. D. Robinson (2021). Current and Forthcoming Approaches for Benchmarking Genetic and Genomic Diversity. Frontiers in Ecology and Evolution 9:622603.
Heinen, V. K., A. M. Pitera, B. R. Sonnenberg, L. M. Benedict, C. L. Branch, E. S. Bridge, and V. V. Pravosudov (2021). Specialized spatial cognition is associated with reduced cognitive senescence in a food-caching bird. Proceedings of the Royal Society B: Biological Sciences 288:20203180.
Hofmeister, N. R., S. J. Werner, and I. J. Lovette (2021). Environmental correlates of genetic variation in the invasive European starling in North America. Molecular Ecology 30:1251–1263.
Lopez, K. A., C. S. McDiarmid, S. C. Griffith, I. J. Lovette, and D. M. Hooper (2021). Evaluating evidence of mitonuclear incompatibilities with the sex chromosomes in an avian hybrid zone. Evolution:evo.14243.
Maxwell, L. M., J. Walsh, B. J. Olsen, and A. I. Kovach (2021). Patterns of introgression vary within an avian hybrid zone. BMC Ecology and Evolution 21:14.
McNew, S. M., L. N. Barrow, J. L. Williamson, S. C. Galen, H. R. Skeen, S. G. DuBay, A. M. Gaffney, A. B. Johnson, E. Bautista, P. Ordoñez, C. J. Schmitt, et al. (2021). Contrasting drivers of diversity in hosts and parasites across the tropical Andes. Proceedings of the National Academy of Sciences 118:e2010714118.
McNew, S. M., M. T. Boquete, S. Espinoza, J. A. Andres, C. L. Richards, and D. H. Clayton (2021). Epigenetic effects of parasites and pesticides on captive and wild nestling birds. Ecology and Evolution.:17.
Odom, K. J., M. Araya‐Salas, J. L. Morano, R. A. Ligon, G. M. Leighton, C. C. Taff, A. H. Dalziell, A. C. Billings, R. R. Germain, M. Pardo, L. G. de Andrade, et al. (2021). Comparative bioacoustics: a roadmap for quantifying and comparing animal sounds across diverse taxa. Biological Reviews. https://doi.org/https://doi.org/10.1111/brv.12695
Turbek, S. P., M. Browne, A. S. Di Giacomo, C. Kopuchian, W. M. Hochachka, C. Estalles, D. A. Lijtmaer, P. L. Tubaro, L. F. Silveira, I. J. Lovette, R. J. Safran, et al. (2021). Rapid speciation via the evolution of pre-mating isolation in the Iberá Seedeater. Science 371:eabc0256.
Walsh, J., L. Campagna, W. E. Feeney, J. King, and M. S. Webster (2021). Patterns of genetic divergence and demographic history shed light on island-mainland population dynamics and melanic plumage evolution in the white-winged Fairywren. Evolution. https://doi.org/https://doi.org/10.1111/evo.14185

In Press

Croat, T. B., A. M. Grace, P. J. Barbour, T. S. Schulenberg, and G. L. Graham (2021). [In press] The process of discovery in and new species from northern Peru, Cerro Colán, Department Amazonas, Province Bagua. Journal of the Botanical Research Institute of Texas.
McNew, S. M., T. Boquete, S. Espinoza-Ulloa, J. Andres, N. Wagemaker, S. Knutie, C. Richards, and D. H. Clayton (2021). [In press] Epigenetic effects of parasites and pesticides on captive and wild nestling birds. Ecology and Evolution.
Melo, B. F., B. L. Sidlauskas, T. J. Near, F. F. Roxo, A. Ghezelayagh, L. E. Ochoa, M. L. J. Stiassny, J. Arroyave, J. Chang, B. C. Faircloth, R. C. MacGuigan, et al. (2021). [In press] Accelerated Diversification Explains the Exceptional Species Richness Tropical Characoid Fishes. Systematic Biology.
Schulenberg, T. S. (2021). [In press] Splits, lumps and shuffles. Neotropical Birding 29.
Sidlauskas, B. L., M. D. Burns, T. J. Buser, N. Harper, and M. Kindred (2021). [In press] Teaching Ichthyology Online with a Virtual Specimen Collection. Ichthyology and Herpetology.

Not Peer-Reviewed

Schulenberg, T. S. (2021). Splits, lumps and shuffles. Neotropical Birding 28:60–68.
Stuart, K. C., R. J. Edwards, Y. Cheng, W. C. Warren, D. W. Burt, W. B. Sherwin, N. R. Hofmeister, S. J. Werner, G. F. Ball, M. Bateson, M. C. Brandley, et al. (2021). Transcript- and annotation-guided genome assembly of the European starling. Genomics.

2020

Aarif, K. M., S. A. Kaiser, A. Nefla, and S. Almaroofi (2020). Over-summering abundance, species composition, and habitat use patterns at a globally important site for migratory shorebirds. The Wilson Journal of Ornithology 132:165.
Aguillon, S. M., G.-F. Siegmund, R. H. Petipas, A. G. Drake, S. Cotner, and C. J. Ballen (2020). Gender differences in student participation in an active-learning classroom. CBE—Life Sciences Education 19:ar12.
Aguillon, S. M., J. Walsh, and I. J. Lovette (2020). Extensive hybridization reveals multiple coloration genes underlying a complex plumage phenotype. https://doi.org/10.1101/2020.07.10.197715
Baiz, M. D., G. R. Kramer, H. M. Streby, S. A. Taylor, I. J. Lovette, and D. P. L. Toews (2020). Genomic and plumage variation in Vermivora hybrids. The Auk 137:ukaa027.
Burns, M. D., and D. D. Bloom (2020). Migratory lineages rapidly evolve larger body sizes than non-migratory relatives in ray-finned fishes. Proceedings of the Royal Society B: Biological Sciences 287:20192615.
Chesser, R. T., S. M. Billerman, K. J. Burns, C. Cicero, J. L. Dunn, A. W. Kratter, I. J. Lovette, N. A. Mason, P. C. Rasmussen, J. V. Remsen, D. F. Stotz, and K. Winker (2020). Sixty-first supplement to the American Ornithological Society's Check-list of North American Birds. The Auk 137:ukaa030.
Cramer, E. R. A., E. I. Greig, and S. A. Kaiser (2020). Strong sexual selection despite spatial constraints on extrapair paternity. Behavioral Ecology:araa001.
Cramer, E. R. A., S. A. Kaiser, M. S. Webster, and T. B. Ryder (2020). Common field data limitations can substantially bias sexual selection metrics. American Naturalist 196:180–196.
Demery, A.-J. C., and M. A. Pipkin (2020). Safe fieldwork strategies for at-risk individuals, their supervisors, and institutions. Nature Ecology & Evolution. https://doi.org/10.1038/s41559-020-01328-5
Faircloth, B. C., F. Alda, K. Hoekzema, M. D. Burns, C. Oliveira, J. S. Albert, B. F. Melo, L. E. Ochoa, F. F. Roxo, P. Chakrabarty, B. L. Sidlauskas, and M. E. Alfaro (2020). A target enrichment bait set for studying relationships among Ostariophysan fishes. Copeia 108:47.
Feng, S., J. Stiller, Y. Deng, J. Armstrong, Q. Fang, A. H. Reeve, D. Xie, G. Chen, C. Guo, B. C. Faircloth, B. Petersen, et al. (2020). Dense sampling of bird diversity increases power of comparative genomics. Nature 587:252–257.
Hejase, H. A., A. Salman-Minkov, L. Campagna, M. J. Hubisz, I. J. Lovette, I. Gronau, and A. Siepel (2020). Genomic islands of differentiation in a rapid avian radiation have been driven by recent selective sweeps. Proceedings of the National Academy of Sciences 117:30554–30565.
Kalvakaalva, R., G. Clucas, R. W. Herman, and M. J. Polito (2020). Late Holocene variation in the Hard prey remains and stable isotope values of penguin and seal tissues from the Danger Islands, Antarctica. Polar Biology 43:1571–1582.
Kolmann, M. A., M. D. Burns, J. Y. K. Ng, N. R. Lovejoy, and D. D. Bloom (2020). Habitat transitions alter the adaptive landscape and shape phenotypic evolution in needlefishes (Belonidae). Ecology and Evolution 10:3769–3783.
Kopuchian, C., L. Campagna, D. A. Lijtmaer, G. S. Cabanne, N. C. García, P. D. Lavinia, P. L. Tubaro, I. Lovette, and A. S. Di Giacomo (2020). A test of the riverine barrier hypothesis in the largest subtropical river basin in the Neotropics. Molecular Ecology 29:2137–2149.
Levy, H., S. R. Fiddaman, J. A. Vianna, D. Noll, G. V. Clucas, J. K. H. Sidhu, M. J. Polito, C. A. Bost, R. A. Phillips, S. Crofts, G. D. Miller, et al. (2020). Evidence of pathogen-induced immunogenetic selection across the large geographic range of a wild seabird. Molecular Biology and Evolution 37:1708–1726.
Lois, N. A., L. Campagna, U. Balza, M. J. Polito, K. Pütz, J. A. Vianna, A. Morgenthaler, E. Frere, R. Sáenz‐Samaniego, A. Raya Rey, and B. Mahler (2020). Metapopulation dynamics and foraging plasticity in a highly vagile seabird, the Southern Rockhopper Penguin. Ecology and Evolution 10:3346–3355.
Mason, N. A., P. Pulgarin, C. D. Cadena, and I. J. Lovette (2020). De Novo assembly of a high-quality reference genome for the Horned Lark (Eremophila alpestris). Genes|Genomes|Genetics 10:475–478.
McNew, S. M., S. A. Knutie, and D. H. Clayton (2020). No evidence of sex ratio manipulation by Galápagos Mockingbirds in response to environment. Journal of Avian Biology 51:jav.02302.
McNew, S. M., G. B. Goodman, J. Yépez R, and D. H. Clayton (2020). Parasitism by an invasive nest fly reduces future reproduction in Galápagos Mockingbirds. Oecologia 192:363–374.
Mikles, C. S., S. M. Aguillon, Y. L. Chan, P. Arcese, P. M. Benham, I. J. Lovette, and J. Walsh (2020). Genomic differentiation and local adaptation on a microgeographic scale in a resident songbird. Molecular Ecology:mec.15647.
Poblete, Y., G. E. Soto, L. Campagna, M. E. Ávila, C. Fernández, C. R. Flores, and A. D. Rodewald (2020). Deforestation patterns shape population structure of the Magellanic Woodpecker (Campephilus magellanicus) in southern Chile. Avian Conservation and Ecology 15:art19.
Rabinowicz, S., N. García, T. Herwood, A. Lazar, B. Hein, E. Miller, and L. Campagna (2020). An avian dominance hierarchy at a supplemental water source in the Patagonian steppe. PLOS ONE 15:e0244299.
Robinson, B. W., J. J. Withrow, R. M. Richardson, S. M. Matsuoka, R. E. Gill, A. S. Johnson, I. J. Lovette, J. A. Johnson, A. R. DeGange, and M. D. Romano (2020). Further information on the avifauna of St. Matthew and Hall Islands, Bering Sea, Alaska. Western Birds 51:78–91.
Rohwer, S., V. G. Rohwer, M. L. Sethi, and J. HilleRisLambers (2020). Life-history implications of migratory Lesser Sandhill Cranes replacing adjacent blocks of primaries synchronously. The Auk 137:ukaa058.
Schulenberg, T. S. (2020). Celebrating Scytalopus. Neotropical Birding 27:31–38.
Schulenberg, T. S. (2020). Splits, lumps, and shuffles. Neotropical Birding 27:60–66.
Shipley, J. R., C. W. Twining, C. C. Taff, M. N. Vitousek, A. Flack, and D. W. Winkler (2020). Birds advancing lay dates with warming springs face greater risk of chick mortality. Proceedings of the National Academy of Sciences:202009864.
Toews, D. P. L., G. R. Kramer, A. W. Jones, C. L. Brennan, B. E. Cloud, D. E. Andersen, I. J. Lovette, and H. Streby (2020). Genomic identification of intergeneric hybrids in New World wood-warblers (Aves: Parulidae). Biological Journal of the Linnean Society 131:183–191.
Trathan, P. N., B. Wienecke, C. Barbraud, S. Jenouvrier, G. Kooyman, C. Le Bohec, D. G. Ainley, A. Ancel, D. P. Zitterbart, S. L. Chown, M. LaRue, et al. (2020). The Emperor Penguin: Vulnerable to projected rates of warming and sea ice loss. Biological Conservation 241:108216.
Tyler, J., M. T. Bonfitto, G. V. Clucas, S. Reddy, and J. L. Younger (2020). Morphometric and genetic evidence for four species of gentoo penguin. Ecology and Evolution 10:13836–13846.
Uehling, J. J., C. C. Taff, D. W. Winkler, and M. N. Vitousek (2020). Developmental temperature predicts the adult response to stressors in a free‐living passerine. Journal of Animal Ecology 89:842–854.
Wagner, D. N., R. L. Curry, N. Chen, I. J. Lovette, and S. A. Taylor (2020). Genomic regions underlying metabolic and neuronal signaling pathways are temporally consistent in a moving avian hybrid zone. Evolution 74:1498–1513.
Walsh, J., S. M. Billerman, V. G. Rohwer, B. G. Butcher, and I. J. Lovette (2020). Genomic and plumage variation across the controversial Baltimore and Bullock's Oriole hybrid zone. The Auk:ukaa044.
Wang, S., S. Rohwer, D. R. Zwaan, D. P. L. Toews, I. J. Lovette, J. Mackenzie, and D. Irwin (2020). Selection on a small genomic region underpins differentiation in multiple color traits between two warbler species. Evolution Letters 4:502–515.
Winkler, D. W., K. K. Hallinger, T. M. Pegan, C. C. Taff, M. A. Verhoeven, D. Chang van Oordt, M. Stager, J. J. Uehling, M. N. Vitousek, M. J. Andersen, D. R. Ardia, et al. (2020). Full lifetime perspectives on the costs and benefits of lay‐date variation in tree swallows. Ecology 101.
Zimmer, C., C. C. Taff, D. R. Ardia, A. P. Rose, D. A. Aborn, L. S. Johnson, and M. N. Vitousek (2020). Environmental unpredictability shapes glucocorticoid regulation across populations of Tree Swallows. Scientific Reports 10:13682.

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